name: inverse layout: true class: center, middle, inverse --- layout: false background-image: url("../images/presentation.png") <div style="position: absolute; bottom: 0%; left: 1%; color: white" > <h3 style="position: relative; width:400px; height:70px">Upload Data in Galaxy@Pasteur</h3> <h4>Olivia Doppelt-Azeroual, Fabien Mareuil</h4> </div> <img style="position: absolute; top: 2%; right: 2%" src="../images/LogoIP-CNRS-C3BI-NBV4small-e1460524231316.png" width="200"> --- ## Upload a data from Institut Pasteur storage (1/2) .center[**Access reserved to Pasteur staff (inside the Institut Pasteur network or via the Pasteur VPN).**] The recommended way to transfer data from the Institut Pasteur storage is to mount your Institut Pasteur home directory (`smb://gaia.pasteur.fr/@home`) and copy the data from there. ** On Linux ** * Install `cifs-utils` if it is not already present. * Create a local mount point in your home directory: ```bash mkdir -p ~/gaia_home ``` * Mount your Pasteur home: ```bash sudo mount -t cifs //gaia.pasteur.fr/@home ~/gaia_home \ -o username=yourlogin,domain=PASTEUR,uid=$(id -u),gid=$(id -g),vers=3.0 ``` * You will be asked for your **Pasteur password**. .center[**REMARK: Use your Pasteur password to mount the share. Galaxy and Pasteur passwords are distinct.**] --- ## Upload a data from Institut Pasteur storage (2/2) ** On macOS and Windows ** On macOS and Windows machines managed by the Institut Pasteur, your Pasteur home is already mounted. If it is not the case, contact **informatique@pasteur.fr**. ** In Galaxy ** * Once `~/gaia_home` is mounted, your Pasteur home is visible by the standard Galaxy upload tool. * Use the Galaxy **Upload File** tool and select the file(s) directly from `~/gaia_home`.